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Hello,
EcoCyc has 4 proteins annotated to GO:0031992 energy transducer activity. The annotations are to an ABC-transporter, a function that is "energy dependent", but not energy "transducing" (ie,…
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We have a term "iron assimilation" which always bothers me.
We have to use it for the transmembrane transport of iron when it needs to be reduced before uptake. This means that this transporter…
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This ticket #14892 will lead to a lot of changes, so I am trying to split up some sub-issues.
Merge 'GO:0015683 ferric iron transmembrane transport'
into
'GO:0098706 ferric iron import across pl…
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"from" is only allowed with IC
spotted fex1:
![report iso from](https://user-images.githubusercontent.com/7359272/31850777-75ac8a4a-b650-11e7-8ce4-d3ae877012cb.jpg)
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should GO:0010106 cellular response to iron ion starvation
be part_of GO:0006879 cellular iron ion homeostasis ?
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Hello,
If IPR007310 catalyzes the synthesis of the siderophore, I would say it's NOT involved in
GO:00015343 siderophore transmembrane transporter activity ?
Thanks, Pascale
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Following up on #14322
GO ID | Term | Action
-- | -- | --
GO:0015563 | uptake transmembrane transporter activity | Merge into GO:0022857 transmembrane transporter activity (**No annotations, n…
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GO:0005215 transporter activity change logical definition from
molecular_function
and ('part of' some transport)
to :
molecular_function
and ('part of' some 'transmembrane transport')
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sib2 is annotated to
iron assimilation by chelation and transport
"A process in which iron (Fe3+) is solubilized by ferric iron-specific chelators, known as siderophores, excreted by a cell; the iron-…
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Cluster deduplication is explicitly wrong.
I found a siderophore cluster with 26 genes and only 14 distinct, which implies all kinds of stuff about cluster combining. Mostly that it doesn't work, whi…