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I have had a look around the Preseq website as I am interested in implementing it as part of our ChIP-Seq workflow, and also to stimulate some discussions with lab members regarding the re-sequencing …
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E.g., when a user clicks on _Search_, display a very brief help info on possible options, like using _+_ for required matches etc. There is enough of white space below the search field to list a few/t…
ghost updated
8 years ago
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[MAIZE_workflow.pptx](https://github.com/identifier-services/IDservices_assessment/files/15158/MAIZE_workflow.pptx)
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More detailed metadata than project metadata
[MAIZE_metadata.xlsx](https://github.com/identifier-services/IDservices_assessment/files/15157/MAIZE_metadata.xlsx)
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[MAIZE_file_locations.xlsx](https://github.com/identifier-services/IDservices_assessment/files/15155/MAIZE_file_locations.xlsx)
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Hi,
I'm trying to use NucleoATAC on our in-house generated mouse ATAC-seq data, but I found below error even with different runs on different files. I'm afraid is it because I am using default (Human…
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Section 2.4 of the MethPipe manual states that "[s]ince symmetric methylation is the common case for CpG methylation, we have _designed all of our analysis tools based on symmetric CpG sites_, which m…
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Average DMR length of identified dynamic growth DMRs is too small ~100bp. Adjust parameters.
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Each chromosome-level analysis uses 5-20Gb of memory for a typical 20-30x coverage whole-genome methylC-seq experiment of human data. I think this is largely due to inefficiencies in how I store the m…