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Hello, I download the source code and extract the data set PDB file, run the problem occurred, how to solve it
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Hi, there
I have used the results from the evm model and aso the liftoff to do the gene annotation. I used the stringtie --merge to combine these two files. There were about 31000 genes in the fina…
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Dear chi-1 Development Team,
I am a researcher who is very interested in chi-1. I recently read the technical report for chi-1 and I'm particularly intrigued by the use of **pocket constraints and …
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Hi Brian
We recently stumbled across the following EVM result. Initially, some genes seemed to be missing from our analysis. In the public NCBI annotation, these genes were still present. After exa…
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Funannotate version
Funannotate galaxy australia V 1.8.15 galaxy4
**Describe the bug**
I'm promoting a functional reannotation using public gff files from NCBI. For this process I've conducted a …
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run_disopred.pl fails for the three titin variants A2ASS6, E9Q8K5, and E9Q8N1 (uniprot accession codes). These are very long sequences, >30000 aa. No non-standard amino acids can be found in the seque…
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Dear Vdemichev,
I am using Waters Synapt G2 to do IMS proteomics experiment.
I have converted the raw files using proteowizard and I combined the ion mobility scans.
I started by generating the s…
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A case that is commonly encountered in molecular biology articles is the description of interactions that occur within a sub-cellular compartment (e.g. nucleus) or near a cellular structure (e.g. plas…
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> Millions of human genomes and exomes have been sequenced, but their clinical applications remain limited due to the difficulty of distinguishing disease-causing mutations from benign genetic variati…
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Meeting follows on from May 2021 meeting at #43.
**When**: Tue June 8th 2pm London (BST).
**Where**: https://ucl.zoom.us/j/99344325484
**Recording**: https://youtu.be/q64K7qyGNs8
**Actions from …