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On the python side, stochastic simulations which are 3d objects are now returned as xarray, i.e. with labelled axes. This turned out to be a great move. IRF are still returned as pandas, although I'm …
albop updated
7 years ago
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### Steps to reproduce
1. Create a model using batch, the facet repeat to repeat the simulation and the facet keep_seed set to false so that we can repeat the simulation having stochasticity with di…
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If I try to run the model here:
https://github.com/OpenSourceBrain/NetPyNEShowcase/blob/master/NetPyNE/test/LEMS_SimpleNet_netpyne.py
in serial or with np1:
mpiexec -np 1 nrniv -mpi LEM…
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TCA_Cycle.xml in the attached project generates the null pointer exception shown below on all stochastic simulators. It also generates an error on reb2sac giellespie. I am not sure of the reason. I tr…
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Hi, droglenc,
I am working on performing some power simulations using the FSA package. I am running into problems with the Zippin method after a number of simulations. Coded as:
zippy1
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There is `SymEngine.jl`,
`SymPy` and `ParameterizedFunctions` (which relies on `SymEngine` but defines a convenient interface for an ode problem and it's jacobian)
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I have some questions about the `simulate` and `irf` commands, in particular how the changing probabilities are treated in the simulations.
The first question is when and how the probabilities are ta…
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# Introduction
Data growth [will be a major factor](http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005265#sec004) in the near future. However, most academic software in system…
0u812 updated
7 years ago
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I've been working for a while in this kind of AZ projects. I started even this project some months ago: https://github.com/Zeta36/chess-alpha-zero
And I have a doubt I'd like to ask you. It's about…