-
```
[ ] hmmscan:longest_orfs.pep.x.Pfam-A.hmm
Error: Failed to open sequence file /nema/short.fa.transdecoder_dir/longest_orfs.pep for reading
```
Apparently it's under the dammit directory:
```
#…
-
```
We are having a problem with speed for interproscan and for nucleotide
sequences that are many it just seems to fail or not end.
We only get one thread on our system even though got many CPU and…
-
The TransDecoder install is downloading BUSCO again instead of TransDecoder.
-
I'm having trouble cd'ing into the git repo and then running the scripts with in the repo. Here is my dockerfile
ENV BINPATH /usr/bin
WORKDIR /evolinc_docker
RUN git clone https://upendra_35@bitbuck…
-
It's unnecessary to bundle it in at this point.
-
```
We are having a problem with speed for interproscan and for nucleotide
sequences that are many it just seems to fail or not end.
We only get one thread on our system even though got many CPU and…
-
@sr320 I have a doubt,
a) in the 02-Geoduck-protein.ipynb notebook, according with the Deduced Protein based on Transdecoder there are 35951 posible proteins (am I right in the interpretation?)
b) fr…
-
If I clear my browser cache (Chrome) the canvasfeatures with a 'segment' glyph permanently show the loading bar. This does not happen for canvasfeatures with a 'gene' glyph. In the console I find this…
-
```
What steps will reproduce the problem?
1. download the cd-hit-v4.5.4-2011-03-07.tgz file from website
2. tar xvf cd-hit-v4.5.4-2011-03-07.tgz --gunzip
3. make openmp=yes
What is the expected outp…
-
```
We are having a problem with speed for interproscan and for nucleotide
sequences that are many it just seems to fail or not end.
We only get one thread on our system even though got many CPU and…