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urgent due to writing paper.
Is there a missing relationship between these two terms?
GO:0031509 telomeric heterochromatin assembly
The assembly of chromatin into heterochromatin at the telome…
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The flattened ancestors for 26726692 include:
``` ruby
["Plantae", "Chromista", "Ochrophyta Cavalier-Smith, 1995", "Phaeophyceae", "Laminariales", "Lessoniaceae", "Khakista", "Bacillariophyceae Haeck…
JRice updated
7 years ago
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Gap junction are only found in animals
(see http://en.wikipedia.org/wiki/Gap_junction).
Therefore, the following terms should have a taxon constraint 'only in Metazoa':
GO:0005921 gap junction
GO:00…
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Add conserved in vertebrates...(have conserved in metazoa)
IDsort icon Name Description Feature_Type Chromosome Strand Start End
SPAC4A8.02c SPAC4A8.02c conserved protein, UPF0047 family …
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@COMBINE-lab
Generate gene level summary count:
Got the following files:
`wget ftp://ftp.ensembl.org/pub/release-87/fasta/homo_sapiens/cdna/Homo_sapiens.GRCh38.cdna.all.fa.gz`
`wget ftp://f…
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Seems like a numpy problem? Encountered with command (NO user-defined db):
```
dammit annotate MMETSP0398.trinity_out_2.2.0.Trinity.fixed.fasta --busco-group eukaryota --n_threads 4
```
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In my software I programmatically retrieve HP via passing the IRI to OWL API (`http://purl.obolibrary.org/obo/hp.owl`). Fairly frequently my script fails with a loading error for HP. This doesn't real…
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There has been some interest (at least 1 person...) that is interested in using funanntoate for non-fungal genome annotation. Anybody else interested? I could probably do something like: arthropods,…
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orthologs and GO terms
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I know well this community (which I'm using as a control to make sure DADA2 works fine for me before proceeding with unknown communities) and I don't have any eukaryotes in there. This is what I get w…