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Hi,
your comments on the swapping made me to realize that the problem can be resolved. otherwise i would've tried using different boards.
i have tried using your code to Arduino nano / Arduino U…
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Hi, thanks for this nice tool!
I wanted to understand the usage of CORE-ATAC conceptually. So, for creating training-set peaks, we will need peaks regions identified from bulk-ATAC-seq? I have scATAC…
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### What happened + What you expected to happen
Running Ray Core using a driver that repeatedly invokes a method on an actor results in a continuous overall increase in the peak RSS memory usage of t…
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CoverageBed counts more reads overlapping with peaks than the number of peaks overlapping reported by clippers internal count.
I'll Investigate this
@mlovci is there something with the read counting …
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Hi Tao!
Thanks for the great tool and services!
I have some questions about calling peaks using -f BAM (SE) vs -f BAMPE (PE) for paired-end reads. Could you please help check if I get them right…
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Hi,
This command will dump output to CpptrajState
`spam peaks.xyz name SPAM cut 12.0 info spam.info out spam.dat reorder
summary summary.dat`
This does not: `spam peaks.xyz cut 12.0…
hainm updated
6 years ago
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Let me start by saying this is a great library and works quite well. However, after reviewing the code and working with it in a real application, I believe you are missing this part of the algorithm d…
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Link to [HIRAC] and [original method].
**Reaction Scheme**
(include molecular weights)
**Outcome**
x mg (y mmol), z%
_NB: notes_
## Method
## Characterisation
### NMR
…
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```python
Traceback (most recent call last):
File "/var/spool/slurmd/job21252148/slurm_script", line 97, in call_peaks_f
narrow_peaks_dict = peak_calling(macs_path,
File "pycisTopic/pseu…
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Tools like MS-Dial state the forward and reverse dot product as well as number of matching peaks / total number of library peaks. Thinking about a function such as `matchSpectra`, I'm wondering if we …