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I noticed that the Z dimension (Zdim) of the RELION 4 beta pseudo subtomogram _data.mrc files equals the cropped box size. Given that the pseudo subtomograms appears like a mini tilt series, I assumed…
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**Is your feature request related to a problem? Please describe.**
In several occasions, users wanted to import a particles.star file (coming from refinements) done outside scipion with relion or CS.…
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Could we have wheel releases on pypi?
I am currently setting up CI builds for a new project which will be using gemmi, and it looks like building gemmi takes about 4 minutes, which adds up to some si…
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Hi,
Recently, I ran into an issue while trying to Relion post-process maps that had been Ewalds sphere corrected using Relion Reconstruct. In Scipion, the input of the Relion post-processing can on…
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if((x ^ y ^ z)&1 != 0)
{
img_in[pixel].x *= -1;
img_in[pixel].y *= -1;
}
(the same as ver4.0)
I don`t know why use " if((x ^ y ^ z)&1 != 0)", maybe it just like "if((x ^ y ^ z)& true)", Is i…
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1. Nelson, P. C. (2019). Chapter 12 : Single Particle Reconstruction in Cryo-electron Microscopy. In Physical Models of Living Systems (pp. 305–325).
* https://repository.upenn.edu/cgi/viewcontent.cg…
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**Describe the bug**
When I try to run any Relion program (2D class, extract particles, motion corr etc.) it appears the error "returned non-zero exit status 127" and then the program doesn't work.
…
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The star file created by warp is not enough for relion 3.1.2 refinement. Without the _optics table, the refinement job terminates. I used the `relion_convert_star `to reformat the star file. But that …
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I installed CUDA 11 to use the newer A40 (Ampere) GPUs. To make a long story short, it seems that some versions of RELION cannot be built with CUDA 11.6, but are okay with 11.2. The following summariz…
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Hi,
I'm running into an error with importing particle coordinates in a star file generated by csparc2relion.py.
I run the script as is prescribed here with extract job symlinked from CS into my…