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`rlang` offers a family of functions that operate on list expressions (this includes `enxprs`, `enquos`, but also `dots_list`). Most of these functions offer optional support for enforcing list eleme…
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Hi there, I just tried to add this package and was running into a couple issues. the first is when I try and run the test case in the readme.
I looked at the main and found this line which define…
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We need to determine if the imputation can help our data.
I'd first run the DREAM AI tool, which has instructions here:
https://github.com/PNNL-CompBio/proteomicsTumorDeconv/tree/main/imputation…
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Hello,
I ran findpaths funtion with imputed 10x matrix according to the example with no error before this step.But the 2 generated files in results\paths\SP_46.SP_* are nearly empty.CellRouter.sh …
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Currently, the assembly workflows ask for the `gatk_tarball` parameter (required) and `novocraft_license` parameter (optional) in the scaffolding stage. However, these tools aren't even used in the sc…
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There seems to be an error with knn imputation when a row has multiple missing values (possibly all missing values or all except 1 missing values). We may need an na.rm somewhere, and/or we may want t…
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Combine length of stay + time to hospital into a single curve (with for seroprevalence) >> paraphrasing from @goldingn
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I'm running pycisTopic but `create_cistopic_object_from_fragments` has significant memory usage.
As has already been discussed (e.g. see https://github.com/aertslab/pycisTopic/issues/14), the main…
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### Which feature do you want to include?
How about also including data imputation inside run_cross_validation pipeline?
### How do you imagine this integrated in julearn?
When use run_cross_valid…
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Our distributional tables currently use AGI as the tab variable. Instead, they should use an "expanded income" measure that more accurately reflects economic well being.
Our first step should be t…