edroaldo cellrouter issues

edroaldo / cellrouter

Reconstruction of complex single-cell trajectories using CellRouter

45 stars 21 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

processtrajectories error

#34 widsquid opened 2 years ago
1
Java error in "findPaths"

#33 AndreaRP opened 2 years ago
0
could not find function "graph.data.frame" when running buildGRN on example code

#32 AndreaRP opened 2 years ago
3
in Linux -- Could not find or load main class cellrouter.CellRouter

#31 xyang2uchicago closed 3 years ago
1
"could not find function"

#30 yudonglin506311858 opened 3 years ago
0
findPaths can't find cellrouter main class

#29 TobiasBB closed 4 years ago
0
I am getting all error when coming back to cellrouter after a year

#28 beginner984 opened 4 years ago
2
processTrajectories

#27 fengyun198503 opened 4 years ago
2
Heatmaps with multiple metadata annotations

#26 AMA111 opened 5 years ago
2
Error in processTrajectories

#25 cjpark85 opened 5 years ago
8
findPaths: argument 1 is not a vector

#24 araksm opened 5 years ago
1
mean.p and mean.np stand for?

#23 AMA111 closed 5 years ago
2
Seurat to cellrouter error

#22 ghoshal opened 5 years ago
3
Overlay TSNE with Cellrouter trajectory

#21 hgb1111 opened 5 years ago
4
plotPathHeatmap function "invalid 'row.names' length"

#20 hgb1111 opened 5 years ago
5
PlotTrajectory without smoothening? Genes that should be relatively constant are not?

#19 hgb1111 opened 5 years ago
1
Gene filtering method & count formats

#18 AswinSSoman closed 2 years ago
5
suitable Normalization for cellrouter - scran vs scone vs SCnorm

#17 AswinSSoman closed 2 years ago
5
Creating a clean featureplot

#16 beginner984 opened 5 years ago
0
cellrouter addInfo

#15 kunUCSD opened 5 years ago
15
Whether can I use specific genes instead of PCto construct

#14 zorrodong opened 5 years ago
9
Using seurat for cellrouter trajectory analysis

#13 fereshtehizadi opened 5 years ago
102
regulate module

#12 JianmeiZhong opened 6 years ago
3
Error: ggplot2 doesn't know how to deal with data of class igraph

#11 JianmeiZhong opened 6 years ago
2
Too many subpopulations?

#10 MingBit opened 6 years ago
10
processtrajectories error

#9 natlasy opened 6 years ago
23
pretty low GRN scores obtained

#8 JianmeiZhong opened 6 years ago
14
Update README.md

#7 Hoohm closed 6 years ago
1
issues on davidclustering

#6 JianmeiZhong opened 6 years ago
1
Function findsubpopulations

#5 LaptopY opened 6 years ago
13
Error in processtrajectories

#4 MingBit opened 6 years ago
5
Matrix

#3 LaptopY opened 6 years ago
1
function processtrajectories

#2 LaptopY opened 6 years ago
2
findpaths function output nearly empty files

#1 JianmeiZhong opened 6 years ago
11