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I would like to report an issue that occurred following the deployment of Version 1.2.
Upon completing the deployment, we noticed that:
All previously uploaded files were deleted from the Blob s…
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Add a table of SRA/Genbank/GISAID/VIC IDs to enable easier sorting of what is in each database, and allow users to query the databases for sequences of interest.
This is in response to issue #2.
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Hi all,
I built a database but failed to shrink it into a mini one. The error messages are:
```
Use of uninitialized value $shrink_block_offset in exec at kraken-master/scripts/kraken-build line 2…
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I'm trying to run RepeatModeler v2 BuildDatabase script on genome 4,9G, but it fails. Nevertheless, RepeatModeler v1 can manage to build a database.
BuildDatabase script works on different parts of g…
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Thank you for developing the tool. I am having an issue running it. Below is the command I ran with docker.
`docker run -d -v /media/Data_1/tianrm/projects/plasmid_identification/4/testing/plasmido…
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As part of moving toward a more Postgres-compatible world where databases are isolated from each other, we're going to stop supporting references between catalog elements (i.e., tables, types, and sch…
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For some of the SQL databases which we have CDC connectors for, it ought to be possible to support capturing from read-only replicas. The major obstacle to this is that we currently rely on watermark …
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Hi. I tried to use easyfig.py from the command line. It worked fine for tblastx, but it seems not to be working for blastn. Apparently, makeblastdb is not been triggered when the option is blastn. Cou…
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DAS-tool 1.1.2 generated the following error:
```
#CPU threads: 256
Scoring parameters: (Matrix=BLOSUM62 Lambda=0.267 K=0.041 Penalties=11/1)
Database file: /ebio/abt3_projects/amylase_oral_stoo…
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Fetching the full information for a video sequence by name via Vampire Squid (`v1/videosequences/name/{name}`) is very slow and bogs down the load process. We should optimize this where possible.
P…