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I'm trying to build dorado 0.3.4 from source using GCC 11.3.0 + CUDA 11.7.0, and I'm hitting the following compilation error:
```
/tmp/easybuild_build/dorado/0.3.4/foss-2022a-CUDA-11.7.0/dorado/do…
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Oxford Nanopore Technologies (ONT) have integrated their new basecaller [Dorado](https://github.com/nanoporetech/dorado) into MinKNOW (the controller software on thier devices, including MinION). I no…
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Hi, could you please add `-b/--batchsize` to `dorado_basecall_server`? It runs out of vRAM for us.
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Hi,
I'm very excited about this package, but I'm unable to generate methylation plots.
I created an `mbr` object from BAM files generated by `dorado` (using `sup,5mCG_5hmCG,6mA` models).
The data s…
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**# Issue Report**
Problem at
cmake --build cmake-build --config Release -j
**## Please describe the issue:**
[100%] Built target dorado_tests
Checking linked libs...
/opt/homebrew/opt…
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# Issue Report
## Please describe the issue:
During installation of MinKNOW or restarting the computer,
`/opt/ont/dorado/bin/dorado_basecall_server --version` hangs indefinitely and the minkno…
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Hi dorado team !
It is me again, sorry ;)
Dorado 0.5.0 was very polite and was only using a little bit less than half of the GPU memory (We have an Nvidia A100 with 80 Gb memory).
Dorado 0…
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Hello everyone,
as of dorado basecalling model version 4.3.0, only 5mC_5hmC or 5mCG_5hmCG modified bases are supported, not 5mC or 5mCG alone. This leads to problems in the downstream analysis, esp…
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Dear ONT team,
I am trying to re-squiggle my RNA data using Remora after I basecalled the data with Dorado. Comparing the analysis from Tombo and Remora on the same dataset, I obtain different resu…
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Previously, I reported a question (get more reads from Dorado). The old question here: https://github.com/nanoporetech/dorado/issues/701
So, could I prevent the splitting using some parameters (e.g…