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**Is your feature request related to a situation you're trying to understand with microCOVID? Please describe.**
I received a first dose of AstraZeneca five weeks ago; it may be 8-10 weeks before I g…
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### Issue:
Installing with
```bash
pip install kazu[webserver]
```
does not work on MacOS with the following error message:
```bash
KAZU % pip install kazu[webserver]
zsh: no matches found: ka…
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When running samples with the -3 option, VarDictJava seems to return nonsensical output for some deletions. In the attached examples, when processed without -3, the variant is marked as being located…
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**Describe the solution you'd like**
[smiles.txt](https://github.com/user-attachments/files/16351635/smiles.txt)
This was previously reported in https://github.com/AstraZeneca/jazzy/issues/445#iss…
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As of now, it is either zero or N/A. I don't believe it's the former. For completeness (so we may have finer granularity by breaking down immunity category into vaccine-immunity, natural-immunity and …
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Hi.
I'm trying to upgrade a bioinformatics pipeline that uses a really old Perl version of Vardict from 2017. (This predates versioned releases of the tool, we're using the code at commit [328e00a…
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Hi! I have found a bug during the training of the caster model. It was caused by the `torch.eye` manipulation, simply it did not specify the device. When the Cuda is available, `torch.eye` will create…
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Dear professor,
Thanks a lot for such a powerful tool.
0 how can I get the vardict version from script, not from the download
1 in the GT field, why the tumor is all 0/0, but normal sample has …
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Can the authors confirm whether Vardict is still actively being developed and supported. Git activity is apparently low in 2023.
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This is a bit preliminary, but I wanted to create a space to organize.
There are a few sections that we should probably add to the new standalone vaccine paper:
- Adenovirus-vector vaccines (@nils…