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Hey, just like many other tools, I'm trying to run PROST and it gives a memory error (actually, it simply kills the terminal) using Visium HD data (600k bins/spots)
Dataset can be found here https:…
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- [ ] https://github.com/biocompute-objects/portal_userdb/issues/358
- [x] https://github.com/biocompute-objects/portal_userdb/issues/360
- [ ] https://github.com/biocompute-objects/portal_userdb/issu…
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Can I use seq2HLA for cancer scRNA-seq data?
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## As a content editor, I want to be able to add a Summary Box paragraph to a Mini Landing Page, so that I can feature prose or additional calls-to-action with grouped information in a way that intent…
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The NCI Cancer Research Data Commons (CRDC) Program (https://datacommons.cancer.gov/) is developing data standards for submitting data to the CRDC ecosystem. As part of this effort, the CRDC Data Sta…
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Identify how samples are encoded and see which ones are hardcoded and which ones are truly random.
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### Is there an existing issue for this?
- [X] I have searched the existing issues
### Feature Description
This feature involves deploying the trained Breast Cancer Detection model as a web-based A…
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Related to issue #29. While the image has been scaled down so it is no longer confusing, it would be nice to instead show this kind of data normalization and batch correction on the running data examp…
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Clinical data from this collection is missing, but per @G-White-ISB was supposed to be ingested: https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=70226903
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How should biomarker scores. Begin to look into algorithm based on publications, FDA approval, EHR, etc
Look at example in IDG. Discuss with Jeremy