-
Hi, I am trying to use PARC for Flow Cytometry and I want to identify Plasma cells which is usually done by manually gating on CD38 and CD138. The gate identifies the high CD38 and CD138 population (u…
-
In testing FACS on the the dev server, save and previewing histograms seems slow.
@ald32 if you have any more details on how to reproduce this, it would be helpful.
-
## *Repository Creation Request*
Use this to get your experiment repository created or updated on GitHub under Virtual Labs organization.
1. #### Coordinating Institute: IIT Guwahati
2. #### A…
-
Hi there Kamil _et al.,_
First off, thanks so much for developing this amazing tool. I am having a pervasive problem with interpreting my smudgeplots - specifically, I am wondering whether they re…
-
This is from Marty on our 10X protocol:
> Experimental procedures followed established techniques using the Chromium Single Cell 5’ Library & Gel Bead Kit (10x Genomics; https://assets.ctfassets.ne…
-
Hi gitdemont,
are you planning to add support for the flow imaging files generated by the machine FACSDiscover S8? The imaging files are saved in a .cvw file, but images can be exported as .TIFF.
…
-
Hi,
I have encountered a problem when using cytofkit (via GUI) and would like to know if anyone else has encountered something similar. cytofkit is not outputting any .fcs files in the result direc…
-
Is it possible to include statements in the ontology `endpoint X is measured by assay Y` ?
If yes, I'll provide a list to include.
If it is already in, please point me to.
-
Hi,
I hope you can help me with this. I am trying to analyze flow cytometry data acquired in a Cytek Aurora. I have 230 files, but I am using only 12 files from 4 different batches to see if I can …
-
Hi,
thank you for this package, it works quite nicely and is much faster than Phenograph!
I am working with 20 million cells from a flow cytometry analysis. When I used a comparatively low "k" (…