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1. They differ in histone modifications within the loop anchor.
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Hi,
I am using chromHMM with histone modification related to tumour sample(multiple myeloma) and two times where the cell acquired drug resistance, coming from two different cell lines.
My aim …
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Hi Burçak,
Can you please help me answer some questions about your great program...
What do these parameters do?
- epigenomics_dna_elements
- mutation_annotation_integration
- sample_based
-…
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If they have been fixed and they have the description in the name
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Hi @ValWood
Here is what you asked for in the email.
The graphs are huge, so I saved them as html files, I think you can see them if you open them in your browser. Then there are the lists with…
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This is more problematic than alleles, because at least for alleles we can name universally but have the description standardized. What should we do for modifications though?
Everyone refers to mod…
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Hi,
Thank you for this nice tool, I recently tested it on some Chip-RX data from my lab.
I would like to ask for your help about a couple of issues I faced.
Among the output files, I get the **…
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* **PTHR ID & PTN node:**
GO:0035194 | post-transcriptional gene silencing by RNA | IBA with WBGene00011333 , PTN000336449
* **Sequences with problematic annotation (ID + gene/protein name…
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To match the term comment.