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Hi,
When I tried to show a [widget](https://github.com/igvteam/igv-notebook/tree/main),
### (1) it is displayed initially when the app is loading,
![image](https://github.com/mljar/mercury/assets/…
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I'm using mpileup to compute the mutation frequencies of a list of known variant sites in RNA-seq. For a small number of indels the AD numbers in the output are much lower than what I'm seeing in IGV.…
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**Is your feature request related to a problem in the current program to new available techology or software? Please describe and add links/citations if appropriate.**
Ribbon https://github.com/Mar…
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Dear team,
We tried installing the packaging using the below link and after completion of installation, getting error message as shown in the below screenshot. Could you please help to fix the issu…
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Hi, IGV team.
I found that IGV.js 2.15.11 hangs at a specific genomic position with loading bam file. (I opened "inspect" from google chrome browser and found that the browser kept downloading bam …
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We might have to be a bit creative here, but visualize your data in the genome browser IGV http://software.broadinstitute.org/software/igv/
see also https://www.youtube.com/watch?v=PY4aZP6wcZs&list…
sr320 updated
3 years ago
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**Description:**
I am attempting to implement authenticated requests to Amazon S3 without using pre-signed URLs to minimize security risks. However, I have encountered challenges with the available…
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`chr12 40668214 Minda_26 N . PASS SVLEN=75;SVTYPE=DEL;SUPP_VEC=PB_ID_56677_2,PB_d_71,ONT_ID_19575_2,ONT_d_36,ILL_MantaDEL:192463:0:0:0:0:0,PB_severus_DEL1445,ONT_severus_DEL1593,ILL_2186766853:2,PB_S…
jzook updated
1 month ago
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Dear processors,
Thank you for developing this tool. I used it to generate results and found that some of the enriched genes are located in repetitive sequences. Should I simply ignore these genes,…
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When I try to install igv_plotter with pip install igv_plotter I get the error that igv.jar can not be copied. See below for full log
[umcg-ndeklein@calculon custom]$ pip install igv_plotter
Collecti…