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Currently we only support testing a specific contrast (either via a coefficient or a contrast vector), but we often do differential expression analysis where we want to test mean shifts in several gro…
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In GitLab by @krumsiek on Jul 12, 2020, 14:13
Function is slower than it should be. Can certainly be improved
Potentially, but calling core functions instead of `lm`:
https://stackoverflow.com/a/398…
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It would be good to keep a change log as changes are made instead of writing it at release time. We have CHANGES.rst now. Do we just add notes to it as we go or shall we use a release notes management…
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This is a great initiative. I think before adding more models, it would be better to reorganise the project and make it more modular. So that when tidying methods are added for models from other packa…
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Hello
I'm trying to analyze a label-free data with DEqMS but I get an error when I apply lmFit.
Error in getEAWP(object) : Data object doesn't contain numeric expression values
My input data i…
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Hello,
This is directly related to [issue 119](https://github.com/HelenaLC/muscat/issues/119).
We evaluated muscat's implementation of limma-voom. It seems it ignores the observation weights f…
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Getting a symbolic regression script similar to pySRURGS within pyGOURGS will need some work. We need to replicate the general interface of `ant.py` but for symbolic regression.
We need to make sur…
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Similar idea to using WLS for GLM diagnostics #3743 #4268, we can also use WLS for other nonlinear models to get local post-estimation analysis.
Note: #2050 I don't remember details right now, but …
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Haven't dug any deeper but the first
```python
>>> import ivfit
```
on a fresh build is about 15 seconds. Maybe keeping an eye out for a way to shorten this as it will impact the CI pipeline of th…
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Hi David,
we appreciate you used Wetterdienst for conducting a Python curriculum at [HeFDI Forschungsdatentag 2022].
If you like it, we may find a good place for the corresponding Python code at…