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After the masurca was installed. runing the command: cd global-1/ && make check
Is it a software problem or a configuration error?
CentOS Linux 8.2
gcc version 8.3.1
```
[root@cori-knl spack-…
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Hi,
I'm trying to run masurca with a hybrid assembly of illumina PE and Nanopore data and I get the following error after running the config file:
Error line 23 of configuration file 'sr_config…
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Hello,
I am trying running an assembly with MaSuRCa but am getting an error at the step: "Computing super reads from PE".
here's the output with the error:
[xxxx@vic xxxx]$ cd Assembly_tes…
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Hello,
We seem to be getting "RuntimeError Usage: Options_minmatch(self,m)" errors in our MaSurca run. Please see brief logs below:
```shell
[Fri Jun 1 09:54:31 BST 2018] Estimated genome size…
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Hi,
I am running a de novo hybrid assembly with illumina PE and pacbio long reads, and i'm facing a disk space issue. The intermediate files that MaSuRCA writes is consuming all my disk space and t…
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(masurca) user@ip-101-2-163-5:~/.sw/MaSuRCA-4.0.5$ ./install.sh
+ pwd -P
+ ROOT=/home/user/.sw/MaSuRCA-4.0.5
+ [ -z ]
+ DEST=/home/user/.sw/MaSuRCA-4.0.5
+ mkdir -p dist-bin
+ PATH=/home/user/…
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make[1]: Leaving directory `/home/group_AM/Venitha/installations/MaSuRCA-3.3.1'
make: *** [aclocal.m4] Error 2
The ./configure command ran perfectly fine.
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I just tried to assembly the tetraploid with MaSuRca 3.2.7, but the file "PLOIDY.txt" shows "1", how can I fix that?
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Hi! We have sequenced some isolates of _Candida auris_ and would like to perform de novo assembly. May we ask is it possible to add support for Nanopore reads?