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Do some analysis of how gold paths and mix triads are being used.
Put the analysis in Jupyter notebook.
cc @turbomam
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- https://github.com/perma-id/w3id.org/tree/master/gensc
- "owned" by Ramona
- this is the real namespace for mixs terms
- https://github.com/perma-id/w3id.org/tree/master/mixs
- "owned" by …
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MIxS v6.2.0 is based on the following input: https://github.com/GenomicsStandardsConsortium/mixs/raw/issue-610-temp-mixs-xlsx-home/mixs/excel/mixs_v6.xlsx
See the mixs6.2_release_candidate repo's […
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Whether is is 6.1 or 7, what do you want to see done in the next year? Please add your suggestions here.
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**Current term details**
```
Term name - ecosystem(s) adjacent to farm
Structured comment name - adjacent_ecosystem
Definition - Description of the environmental features that are adjacent to the …
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I have had a request from the NCBI BioSample team to include examples for each of the terms in the MIxS packages. We would like to use these for our documentation for submitters.
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- [x] #50
- [ ] #51
would be based on data/mixs_v6_environmental_packages.tsv
| Environmental package | Structured comment name | Package item | Definition | Expected value | Value syntax | Exa…
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- `gsctools/mixs_converter.py`
- `gsctools/packageutils.py`
- `tests/test_seed_schema.py`
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For the DWC-MIXS mappings (see [repo](https://github.com/tdwg/gbwg/tree/main/dwc-mixs)), we are finding terms that map in sense that they are about the same thing, but the specification for the syntax…
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This is all based on Google Sheets, not https://github.com/GenomicsStandardsConsortium/mixs/blob/main/mixs/excel/mixs_v6.xlsx
terms with multiple IDs
---
host_body_product
host_sex
host_symbion…