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I got navis to fetch neurons from neuromorpho in Blender. After I ran the following code:
```python
import navis
import navis.interfaces.blender as b3d
from navis.interfaces import neuromorpho a…
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Links between branch points and their children are not drawn in the 2D canvas as of version 4.0.6
![image](https://user-images.githubusercontent.com/44130022/148600005-b0671ba5-425c-4ac3-baf4-28fb2…
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After discussing this today, we probably want to support "Cell Body" definition format as, due to historical reasons, there are morphologies using that soma definition format and other tools are able …
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## Context
NEURON issue. TypeError: _declare_contour() takes 2 positional arguments but 3 were given
### Overview of the issue
A new computer with a fresh Mint 20.1 installation and the latest …
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There is a set of rules for reconstructing soma morphologies from swc and asc files here: http://neuromorpho.org/SomaFormat.html, that describes how to handle somas described with cylinders, countours…
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@wvangeit suggests adding a feature to the dendrogram plotting so that one can toggle what the 'first' diameter of a section is: whether it's the last one of the previous section or whether that is sk…
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I am trying to plot the dendrogram of a non-neuronal cell: http://neuromorpho.org/neuron_info.jsp?neuron_name=S1_1_1
using the following code snippet:
`
from neurom import load_neuron
…
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I'm trying to create a standalone soma with diameter 1 micron in swc that I can load in NEURON (import3d).
However, I get error / warnings for both these possibilities:
- one point soma
```
1 1 …
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Currently the only somas, that follow the below spec, are considered correct 3-point somas:
```
// The only valid neuro-morpho soma is:
// 1 1 x y z r -1
// 2 1 x (y-r) z r 1
// 3 1 x (y+r) …