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I tried the current 1.2.3 version with the T1w and bold data preprocessed using fMRIprep 20.2.1, 20.2.0, or 20.2.0rc2.
In general, everything works quite well in the volumetric space analysis.
Howev…
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### Description
cc: @jcfr @lassoan @pieper
Nifti1 has [scl_slope and scl_inter](https://nifti.nimh.nih.gov/nifti-1/documentation/nifti1fields/nifti1fields_pages/scl_slopeinter.html). The equiva…
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The BIDS 1.x directory structure places scans within anat, func, dwi folders. Within each folder one can have multiple different scans. I propose to go back to the one scan per folder structure so a…
tsalo updated
4 years ago
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@ajoshiusc @HaleAkrami I ran ReNA using only available subjects I have. And here is a plot for MSE: https://github.com/ajoshiusc/lesion-detector/blob/master/src/sergul/rena_mse_3subjects.png
Is it …
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For example, when drag'n'drop a `file.nii.gz` compressed nifti file into the volview website, it cannot be opened.
![image](https://github.com/user-attachments/assets/98685e07-adf1-4f58-bce1-606f6604…
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I want to use this but I don't know how I am supposed to right now. Can you clarify if this is/isn't compatible with the new Cornerstone3D? `package.json` doesn't list it as a dependency (peer or othe…
kousu updated
5 months ago
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Hello everyone, I am a Computer science college student and new to radiomics and medical science.
I want to build a radiomics feature-based classifier. I have to take CT scans Dicom images.
Firstl…
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Motivation: we want to upload the data to OpenNeuro, so we need to BIDSify them.
The magnitude data are _already_ in BIDS and are located here (internal server): https://data.neuro.polymtl.ca/datas…
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Hello,
I have been able to train a model on my own data. Now I want it to produce contours on an unseen CT data and want to be able to see it. Can anyone direct me to be able to do that? I am sorr…
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### Description
Looks like motion correction is being killed by the "watcher" process. Apologies if that's not the right terminology- I'm not sure how that works.
### Steps to Reproduce
SCT 4…
baxpr updated
2 years ago