-
Create an OntoGPT runner for comparison with Exomiser in disease prioritisation.
- [x] #160
-
Hi - I am trying to add GPT-4o to the ./src/ontogpt/models.yaml per below but am getting an error message:
```
KeyError: 'Could not automatically map gpt-4o-2024-05-13 to a tokeniser. Please us…
-
on local model
-
Hi, we are using GPT provided by Azure. How should we configure the token for that? Many thanks
-
Not sure how widespread this formatting is, or if it's something specific to my schema, but it seems like the support for n-ary relations introduced in #349 breaks support for binary relations, so wan…
-
The `synonym` function is currently broken, likely due to recent changes in how the CLI calls templates.
Example:
```
~/ontogpt$ ontogpt synonyms "otitis media" --context "healthcare"
Traceback (m…
-
The model `gpt3.5` doesn't work with the OpenAI API anymore. Using it will produce an error like this:
```
ERROR:ontogpt.clients.openai_client:OpenAI API connection error: Error code: 404 - {'error'…
-
I created a conda environment with a Python version of 3.9, then install the `ontogpt`:
```bash
conda create -n ontogpt python=3.9
conda activate ontogpt
pip install ontogpt
```
It works fine. …
-
I'm applying OntoGPT over a large (~100,000) set of documents. I have the extraction working fine, and have the output for each document saved to an individual file.
But I need to transform the YAM…
-
Related to the change introduced in #304.
For each new YAML output document appended to the `output.txt` file, the `extracted_object` item is correct (only contains information from the current inp…