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I'm running the MedSAM2 code for the "3D case - Abdominal Multiple Organs Segmentation" following the provided instructions. After downloading the BTCV dataset and setting up the environment, I encoun…
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Thank you very much for sharing code for this project.
My fore- and background mask is:
![image](https://user-images.githubusercontent.com/29271051/127131819-e609d8f9-7047-4a88-9858-315c7ab39d4…
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### Thank you so much for such an amazing model. With such high capabilities.
I have a few doubts ,
I ran the pred_psuedo.py inference , following the repo instructions, like this :
`(universalm…
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Use nested pipelines to reduce code duplication - pipeline as an InferenceClass object
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Hi, I have a bug report/ enhancement request:
As for the enhancement part: when I create a ROI in frontal orientation, save it and then try to import it in, eg sagittal orientation, it simply won't…
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Hey there,
I was thrilled to finally find a tool that would convert NIfTI to DICOM, including segmentations. But unfortunately, MR is an unknown modality at the moment. I was wondering if you plan …
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我的训练集的图像和标签都是3d的,但是标签是多标签在同一个通道中,用不同的像素值标记的结构。但是我看了一下pre_CT_MR.py文件中的预处理,只判断了一个像素值大于0也就是前景,那么我有一个问题,如果是我这样的多标签的应该如何处理。或者说需要单独将每个标签单独做成图像和其对应的二值掩码。
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Hi! This is really amazing work! It would be awesome to have the model weights shared on Hugging Face. Here's some more information how to do so: https://huggingface.co/docs/hub/models-uploading
Happ…
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As Im trying to use this model to do individual organ segmentation, for eg. for lungs , liver, spleen, kidneys, etc.
Im using the model from monai , im able to run the code and everything runs fine ,…
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Hello,
I have been exploring the capabilities of the OSPRay library for volumetric data rendering and I must say, it's been a great experience so far. However, I have come across a particular requi…