wasserth TotalSegmentator issues

wasserth / TotalSegmentator

Tool for robust segmentation of >100 important anatomical structures in CT and MR images

Apache License 2.0

1.43k stars 241 forks source link

issues

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Docker setting

#368 recreateme opened 3 days ago
0
Question regarding the --roi_subset accuracy.

#367 maksymfritsak closed 56 minutes ago
1
have issue reading dicom files

#366 mingtian126 opened 1 week ago
1
HTTPS Connection Pool error

#365 sovanlal opened 1 week ago
1
【Video courses】Chinese version 3D Slicer TotalSegmentator installation and usage tutorial.

#364 simzhangbest closed 54 minutes ago
1
--output_type dicom does not work with --task='body'

#363 PredExt closed 52 minutes ago
1
CT skull segmentation fills hole in the skull

#362 pajdakovicm closed 2 weeks ago
4
Installation Error: subprocess-exited-with-error during pip install .

#361 NandiniLReddy opened 3 weeks ago
1
Results on the testset of v2

#360 Becmamba closed 3 weeks ago
2
FutureWarning in predict_from_raw_data

#359 andersenthomas closed 2 weeks ago
1
Fine-tuned worse than TotalSegmentator

#358 nairouzshehata opened 1 month ago
0
How to integrate my model into the Totalsegmentator Run

#357 tedi14 closed 1 month ago
1
CI: Bump codespell-project/actions-codespell from 2.0 to 2.1

#356 dependabot[bot] closed 1 month ago
0
coronary_arteries

#355 Fa20 closed 1 month ago
1
Any way to segment male genitalia?

#354 dim6003 closed 1 month ago
1
TotalSegmentator command HTTP request failure, network unreachable

#353 Fjrm-297 opened 1 month ago
1
Fixes #351: weights_path for "task_id == 8"

#352 mario-huang closed 1 month ago
1
when use task liver_vessels, it always says "Downloading model for Task 8"

#351 mario-huang closed 1 month ago
0
How to merge ground truth labels to feed nnunet as training samples?

#350 pooya-mohammadi closed 1 month ago
1
Fine-tune aorta which taskID

#349 nairouzshehata closed 1 month ago
1
Cannot find "brain_structures"

#348 lwbhahahaha closed 1 month ago
2
Errors when Training nnUNet with Totalsegmentator

#347 tedi14 closed 1 month ago
2
RuntimeError: Encountered inf in predicted array. Aborting...

#346 hari3100 opened 1 month ago
2
PyTorch module not found

#345 gleesoi opened 1 month ago
7
How to use pre-trained weights?

#344 aymuos15 opened 1 month ago
1
Are there any examples on how to use the --roi_subset <list of classes> and totalseg_combine_masks .

#343 hari3100 closed 1 month ago
2
Task_name headneck_bones_vessels is not functional - Readme Needs to be Updated with correct version installation

#342 Aakanksha-Rana closed 1 month ago
2
Can 3D Slicer's TotalSegmentator segment total, body, appendicular bone, tissue types all at once?

#341 dgcare opened 2 months ago
1
Some questions about how to use rs or rsr

#340 yezanting closed 2 months ago
0
Separating masks in multilabel NIFTI file

#339 Arconine1 closed 2 months ago
1
totalseg contrast phase

#338 staniPetrox closed 2 months ago
2
Add Hugging Face download option

#337 edreisMD closed 2 months ago
0
What does this need to be installed? bash: totalseg_set_license: command not found. Thank you for your answer

#336 Airliin opened 2 months ago
6
Can't pickle local object 'starargs.<locals>.<lambda>'

#335 ChekrounMohammed opened 2 months ago
0
Poor cardiac segmentations, including highres

#334 yakovdan opened 2 months ago
1
Nothing being segmented in task coronary_arteries

#333 thimabru1010 opened 2 months ago
2
Differentiation between right and left in appendicular bones?

#332 Billiam2468 opened 2 months ago
1
Issue creating standalone exe with pyinstaller

#331 KavyaAlur opened 2 months ago
0
Any trained model for cardiac MR segmentation?

#330 wsonia opened 2 months ago
1
Thank you and inquiry about MR preprocessing

#329 kulsoom-abdullah opened 2 months ago
6
converting result from nifti to Dicom

#328 KavyaAlur opened 2 months ago
1
Workaround to accept nrrd images as input

#327 phcerdan closed 2 months ago
0
Correct Tasks / Task IDs

#326 staniPetrox opened 2 months ago
2
Package snomed mapping as a totalsegmentator package resource

#325 jcfr closed 2 months ago
5
Update SNOMED-CT mapping

#324 fedorov opened 3 months ago
8
Slice increment not consistent error

#323 grinerD closed 3 months ago
1
Segmenting Visceral Fat from CT Files

#322 itscarolinesong closed 3 months ago
2
femoral artery and femoral vein

#321 rudolf-saito opened 3 months ago
2
What command I should use if I want to segment only specialized regions like heart atrium and heart ventricle in task heartchambers_highres?

#320 lq2233 opened 3 months ago
1
Enrollment of license returns time out error in ubuntu terminal

#319 YeseulKima closed 3 months ago
1