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A gut microbiome signature for HIV and metabolic dysfunction-associated steatotic liver disease
https://pubmed.ncbi.nlm.nih.gov/38162648/
I chose this particular article because its HIV-related. H…
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Guild-Level Microbiome Signature Associated with COVID-19 Severity and Prognosis -- Guo M et al. -- mBio
https://journals.asm.org/doi/10.1128/mbio.03519-22
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https://mp.weixin.qq.com/s/mjW6lJoiIVJaCV3hNizoxA
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**Submitting author:** @CedricMidoux (Cédric Midoux)
**Repository:** https://forgemia.inra.fr/migale/easy16s
**Branch with paper.md** (empty if default branch):
**Version:** v24.07
**Editor:** @fboeh…
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These are readily available e.g. in `vegan`, and perhaps also for SE objects through the SCE ecosystem. Some examples will be needed in the beta diversity section.
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Hi,
I wanted to asses the effect of lifestyle on genome size, but the script failed in producing the distance matrix. I guess it is because the dataframe has only one column (with organisms in rows…
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I am working on a microbiome longitudinal analysis.
I have two arms (antibiotics treatment vs placebo). We extracted the 16s RNA of each patient at different months from inclusions (from inclusion …
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https://mp.weixin.qq.com/s/T6vhS3D84GkSwJNIvaP0LQ
ixxmu updated
3 weeks ago
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Hello, I have a dataset with timepoints and would like to apply Tensor factorisation.
I would like to aubstract the baseline in clr space in order to normalize the inter individual differences.
Ho…
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I'm thinking about adding in [Lovell's Proportionality](http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004075) metric into `skbio.stats.composition`.
Basically, it's an awesom…