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Hi,
I am trying to run contig extender on my contigs assembled using MegaHit, using default parameters and Bowtie2 v2.4.1.
I encounter the following error :
> ValueError: Buffer dtype mismat…
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I was speaking about the mechanism of action of Series 3 (OSM-S-106, MMV025100) at Monash University and David Shackleford was in the audience. He independently brought up the issue of carbonic anhydr…
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As per [suggestion](https://github.com/malariagen/fits/issues/56) I have written and run code to pull data only from MLWH and Subtrack, and not from iRODs/baton. See [this code branch](https://github.…
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I'll periodically check which branches Github deem as stale, and assign authors to either rebase or remove the branches.
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I have encountered some bugs and failed to run them on several machines. The first problem is the dynamic library, but this is not the main problem. You can see the difficulties encountered in running…
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One nice thing to do would be to automatically take a figure like this one from the Schaap review:
![Screen Shot 2019-03-11 at 12 35 33 PM](https://user-images.githubusercontent.com/441101/5415236…
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**Background**:
Pathway diagrams are widely used in genomics to describe changes occurring in signaling pathways resulting from genomic alterations. There are [several tools](https://www.ncbi.nlm.n…
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@nateMJ Needs an Event form for extracting microscopy data to OpenSRP. This needs to be completed this week. The items below were taken from https://docs.google.com/spreadsheets/d/0B8sJOkOxfXHcc0pMRnU…
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At the moment, the default behaviour of the lineplot client for a continuous variable _when the user has not asked for any binning_, is to ask the back end to use a binwidth of 1.
I know this was a…
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Hello,
I've recently started using this pipeline for a project I'm working on and I've run into an issue. I ran one fasta file, one bam file and its corresponding bed file, and a custom config fil…
cm760 updated
5 years ago