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The binding_17 rule extracts complex formation events for `A is associated with B` sentences. However, `is associated with` seems to be usually used to draw an observational, statistical link between …
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GO:0004698 calcium-dependent protein kinase C activity
GO:0009931 calcium-dependent protein serine/threonine kinase activity
GO:0010857 calcium-dependent protein kinase activity
all mean the same…
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I'm not really sure where to begin on this. First step would be to check the AETIONOMY code on gitlab to see what @cebel was able to load before.
Possibilities:
- InterPro XML contains much more…
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Describe the issue:
- I was chatting with Max at Jina and he mentioned that it's difficult to ascertain the quality of results for the protein search. Do you know anyone I could reach out to who migh…
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I've been running Roary in order to use the presence/absence tables as input for training ML models (to identify sub-species groups based on shared genomic features). As I don't really care if genes a…
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searching for human protein id 'Q9UI25' returns unmapped id in homolog search API
{
"search": {
"product": {
"version": 15,
"content": "PANTHERDB"
},
"mapping": {
…
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This issue contains monthly updates to the ranked list of PubMed papers for curation. The full list can be found [here](https://github.com/tanayshah2/bioregistry/blob/5560dcf284f2c0309287e0a5a551e435e…
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Hi,
is it feasable to use abricate for mass screening of protein sequences instead of genes (i.e. use tblastn instead of blastn)?
Thanks,
Carlus
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1. Myosins (we’ll have antibodies and tagged myosins for students to use in the lab)
2. Forkhead transcription factors, including RFX. We are currently generating antibodies against RFX proteins, but…
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Should they be subject to the 1-year expiration date rule?
We probably want to remove old 'ISM-like' annotation: TIGR_TIGRFAMS identifier in their with/from. The type of the entities supplied by t…