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Hello,
I am unable to see a .db file created using either extract or convert. I set up the same sample folder as the tutorial, with 10 of my genomes in the fasta folder.
java -jar EzAAI_latest.…
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- [ ] Start w/ @the-mayer's `rmd` report
- [ ] Identify proteins to run through MolEvolvR
- [ ] Create case studies
- [ ] Which additional summarization/visualizations would help with these case s…
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Should this document attempt to discuss China's claim that it has identified Patient Zero, per this article:
https://www.scmp.com/news/china/society/article/3074991/coronavirus-chinas-first-confirmed…
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**Date**: July 12th 2022
**Time**: 2pm UK time ([other times](https://www.timeanddate.com/worldclock/meetingdetails.html?year=2022&month=6&day=14&hour=13&min=0&sec=0&p1=43&p2=136&p3=37&p4=771&p5=235&…
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Now that the [minimum metagenome covers](https://dib-lab.github.io/2020-paper-sourmash-gather/) paper is reasonably baked, I've been thinking about next steps towards strain-resolved metagenome decomp…
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**Date**: Feb 8th
**Time**: 2pm UK time ([other times](https://www.timeanddate.com/worldclock/meetingdetails.html?year=2022&month=2&day=8&hour=14&min=0&sec=0&p1=43&p2=136&p3=37&p4=771&p5=240&p6=5&p7=…
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## Description
All wiggle files are different. Similar with GFF and MasterTables. Hence, it is important that multiple datasets are tested. For this, the PO has provided different datasets (also smal…
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Hello,
I have been getting an intermittent 1;31m*** ERROR ***. I'm unsure what is causing it. When I rerun the sample amrfinder works perfectly fine and all the rest of the samples in the run men…
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Hi,
We've been trying to simulate Zymo mock communities using your "even" pre-trained model. We've consistently found *Staphylococcus aureus* to be seemingly undersimulated, while *Cryptococcus neo…
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The 'https://github.com/ncbi/amr/wiki/Curated-organisms' states 'Cronobacter' in list but its usage in amr throws error- it works fine without mentioning its name in '-O' though!
amrfinder --annota…