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Hello Radiomics community!
I have some questions regarding to dealing with negative intensity voxels.
I have brain tumor (glioma) MRI data set and it has been normalized relative to white matter…
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Hello,
I'm a beginner at pyRadiomics. I've installed radiomics module in the slicer.
The steps I used for the feature extraction:
Imported the 2D Dicom image (one slice) for the test.
Drew an …
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I get a strange message, when enabling all features and image types:
File "/usr/local/lib/python3.6/dist-packages/radiomics/base.py", line 162, in calculateFeatures
self.featureValues[featur…
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I use the code based on the "helloFeatureClass.pynb",which is the example of pyradiomics
code:
/*
from radiomics import firstorder, glcm, imageoperations, shape, glrlm, glszm, getTestCase,featuree…
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Hi everyone,I'm trying to extract radiomics features from some 3D CT images. I referred to the example file which named batchprocessing.py to handle our renal cancer images, and got more than 1000 fea…
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Hi @JoostJM @fedorov, Sorry to bother you again but this time I'm really desperate!
I was calculating all features, both from the original image and from the Wavelet filtered image and it worked fin…
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Profiling PyRadiomics using the brain1 testcase (256x256x25 voxels) with full-mask
- all features
- Original, LoG (sigma 1, 3 and 5), Wavelet (1 level, 8 decompositions)
Main bottlenecks:
- GLSZ…
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If I do something like
```python
extractor = RadiomicsFeaturesExtractor(...)
extractor.execute(image, mask, label=2)
```
I get the following error
```python
Calculating features with label: 2…
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ITK filter has SetNormalizeAcrossScale = false by default. Make sure this is corrected to True if needed when LoG is integrated into the new classes.
http://www.itk.org/Doxygen/html/classitk_1_1Lapla…
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@hugoaerts what do you want to have as the contact email? maybe a mailing list?