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1.0_analysis/4.0_pcaExplore
chunk 5: ReactomePA
```
#creating a vector of ENTREZID_ids
Gene_ID
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/noriakis/CBNplot
Confirm the following by editing…
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Hi,
Thanks for developing Basilisk works effortlessly for me (Ubuntu 20.04).
However, a colleague of mine using Mac /w an M1 chip gets the following error on the same env that I use:
```
Se…
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I am using oncoplot function to generate the oncoplot for my mutation data. I am also adding a bunch of annotations in the figure. The legends for those annotations are going out of the figure and I t…
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Hello
I've been using clusterProfiler for a while, and I've been having this issue for 3 days on multiple computers. compareCluster works great with fun = "enrichGO" / "enrichKEGG" but not "enrich…
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Hi,
I have RENV_AUTOLOADER_ENABLED = FALSE in my .Renviron. When I run `renv::load()` in my project, I get the following warning. Is this expected?
> Warning message:
> target file '/Users/lucy…
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MISTAKE: package or namespace load failed for ‘clusterProfiler’:'namespace:DOSE'没有出口‘dotplot’这个对象
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Hello! I am trying to run a Pathway GSEA, but have been facing issues with the correct formatting of the geneList argument. Through the Biomedical Knowledge Mining using GOSemSim and clusterProfiler p…
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https://mp.weixin.qq.com/s/BsWzWFZnIn8KftIi1AkrTg
ixxmu updated
2 years ago
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A gseaResult object generated by gsePathway function in ReactomePA could be accepted by ridgeplot function. But if you use the setReadable function to deal this gseaResult object, the ridgeplot functi…