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hi again,
I have a question about the exact configuration of your runs for the experiments reported in the paper, which were conducted either on AWS Batch or SLURM.
For these large-scale GWAS r…
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Hi Joelle,
I hope you're well. I'd be grateful if you could please help me with a problem in gene based burden testing using the --rgc-gene-p command.
The output to the console reports no issue…
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I think gcc 13.2 and later are more strict about needing to have headers included in a file if you are using functions there.
g++ -O3 -Wall -std=c++17 -DWITH_HTSLIB -o bgz_writer.o -c bgz_writer.cp…
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Sometimes it's useful to use fractional phenotypes in a case-control GWAS, like in one formulation of [GWAS-by-proxy](https://www.nature.com/articles/ng.3766) where 1 = case, 0 = control, and 0.5 = fa…
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from the jenkins log:
```
[ 75%] Performing build step for 'mame'
mingw32-make.exe REGENIE=1 VERBOSE=1 NOWERROR=1 PYTHON_EXECUTABLE=python2 CONFIG=libretro LIBRETRO_OS="win" ARCH="" LIBRETRO_CPU="x8…
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Would be great to support mutually exclusive instead of cumulative --aaf-bins. This can currently be simulated by running regenie multiple times with different variant lists included each time based o…
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Hi,
I'm having a strange issue with the miami plot.
![output](https://github.com/Cloufield/gwaslab/assets/20525305/99f91555-2602-44c3-b1e7-ffb9f45ecb32)
I got the miami plot.
And here's the origin…
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Hello,
Im using REGENIE v3.2.5.3 to run in parallel step 1 level0 with 10 job arrays. It used to work when I was using another dataset but with my new dataset (bigger version of the old one). I obt…
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Hello emularity team,
First thank you for this wonderfull loader !
I've tested mamemegadriv.js driver (making some litlle modification to console example html) with a custom rom i've compiled fr…
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Hello,
Thanks again for the excellent resource and documentation.
There is increasing concern about the issue of selection bias within large biobanks. One way of addressing this is the incorpo…