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### Is there an existing module for this?
- [X] I have searched for the existing module
### Is there an open PR for this?
- [X] I have searched for existing PRs
### Is there an open issue for this…
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The GWAS Catalog needs to promote data submission to all corresponding authors of publications that do not currently have summary statistics. An automated email should be sent to all corresponding aut…
ljwh2 updated
3 years ago
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Here
```bash
Processing antitarget: AHKYT7DSXX_S73_L001_BQSR
Keeping 0 of 40893 bins
WARNING: most bins have no or very low coverage; check that the right BED file was used
```
I don't thi…
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Dear FACETS team, thank you for developing this tool. I have been getting errors when running `emcncf()` because of an insufficient number of heterozygous variants. The following command reported 931 …
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Hi,
i'm confused with term 'resolution' in cnv.
what does it mean exactly?
Jeongmin
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I am using VarDict (v1.8.2) to call variants from a targeted-sequencing dataset in single sample mode. I am running VarDict with the the pileup (-p) and no local realignment (-k 0) options in order to…
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I am part of a team doing targeted sequencing of PolyG loci. We have previously been using LobSTR for genotyping polyG sequences from reads prior to a consensus making step (see https://github.com/ri…
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Hi,
Handy bit of code! My output ranges from 2 to 33 though and are highly correlated with the different sequencing experiments (same cell type, different depth of sequencing).
for example: output …
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Hello Dr. Liu,
Thank you for creating such a great tool and keeping it updated. I am trying to perform assembly of TCR with my spatial transcript data in single cell mode. However, since the size o…
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**Is your feature request related to a problem? Please describe.**
The new-style imports (based on depositing files in an external storage and registering the case as phenopackets) is currently unsup…