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Modelling data was pinned to incorrect stream but was corrected in bcfishpass. Now the `bcfishpass` object needs to be updated. This will require a build of the database on our side or a dump from s…
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![image](https://user-images.githubusercontent.com/17739639/157672089-bf0fcb13-c6c9-4c33-abb1-486a16a2bc14.png)
@tischi Should it not include all steps of the GUI activity, I don't see GUI activity…
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For my project I need distanceTransform and watershed. I am willing to implement and pull request myself, but need some direction on how to integrate. Any assistance is much appreciated.
Essentially…
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1. Combine all the DEM processing steps into a single HPC job
2. Consider integration with OOD to enable job submission to the batch queue for larger watersheds instead of waiting for the CyberGIS Co…
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place to put changes that are common to both
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Watershed segmentation gives errors in all but the most perfect of images, see e.g. our mailing list [1]. I saw a mention on the ImageJ mailing list (for the same problem) of a Fiji plugin called wate…
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Hi Ethan, I git clone this watershed-workflow repo and followed the instruction of using docker to install this package. I have encountered two issues when I tried to test the notebook.
1.
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Some algorithms are better handled at watershed scale. However, the model is expected to run with multiple watersheds. As a result, some redesign may be needed.
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Currently, the TDX streams look very dense when zoomed out:
Compare this with US Medium Resolution Streams, of which only the higher order streams are shown at low zoom levels:
This comm…
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Already installed watershed and skimage in python. But i am not able to import the file . And the error is occured as "cannot import name 'watershed' from 'skimage.morphology' "