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Hi,
Could you please put a never_in taxon constraint on bone-related terms for D.mel/Drosophila/Insecta?
I've tried to list terms that are parent terms or isolated child terms, but there may well be…
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Flybase appears to be the only consortium group that
has used the GO term "hatching" (GO:0035188).
Well...fish hatch too! I would like to use that term,
and the def does not preclude me from doing s…
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Hi--
I would like to propose the following new component terms to annotate gene products that localize to the C. elegans cuticle. These terms would be children of the existing term proteinaceous ext…
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gamma-glutamyltransferase activity
Add comment: This reaction is used in assays to detect the presence of the enzyme gamma-glutamyl transpeptidase (GGT), but the physiological function of GGT is gluta…
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See:
https://github.com/cmungall/anatomical-similarity-annotations/blob/master/scratch/inferred.tsv
Are these valid inferences? E.g. if skin is homologous, and limb is homologous to fin, then trivial…
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As it stands at the moment GO:0016117 (carotenoid biosynthetic process) has the taxon restrictions never_in Ascomycota and never_in Metazoa. But there is carotenoid biosynthesis in the Ascomycota …
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IPR002866 Maturase, MatK has a GO mapping to:
GO:0009507 chloroplast
This means that S.pombe Swiss-Prot entries P05511, P03875 and P03876 (amongst others) have IEA annotations to chloroplasts.
I'm…
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I think that this GO id is incorrectly contrained to metazoa. It would be useful if it were able to include, for example, secretions of cyst wall material from Giardia lambli which form a protective p…
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ftp://ftp.geneontology.org/pub/go/quality\_control/annotation\_checks/taxon\_checks/taxon\_go\_triggers.obo
This rule should be less restrictive, as Arabidopsis have male germ cell nuclei (see: PMID:…
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fission yeast msh2 is fairly well characterised and is involve din a mismatch repair pathway.
Inappropriate annotation transfer includes
cell cycle arrest PANTHER:PTHR11361_AN159
double-strand break …