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Hello, and thank you for your outstanding work.
May I ask how the data under the data file are obtained, can you add the generation method, such as GB1_zero_raw.csv, GB1_structure.csv and other files…
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We (Lund) suggest two additional External Links for variants pages (Clinical SNV and INDELs).
1. Decipher: Clinical-info page for genes e.g. https://www.deciphergenomics.org/gene/POLR3B/overview/cl…
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Thanks for the nice tool! Is it possible for this tool run against the customed microbial genomes?
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**Is your feature request related to a problem? Please describe.**
VariantValidator, when having received too much work for one request, times out. This happens when, e.g.,
1. A large variant is sub…
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Docking simulators give a useful although rather janky metric for how an antibody would potentially bind to the target antigen. Most of these tools generate thousands of possible configurations and th…
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These genes have had revised structures which means that they
These genes do not have signal peptides because the sequence does not match the UniProt sequence at the N-term.
https://www.pombas…
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Reviewing the annotation intersection violations alerted us to:
https://amigo.geneontology.org/amigo/reference/PMID:12485443
This paper describes plasma membrane lipid profiling, and as such isn't…
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Hello,
I've tried to annotate genome with both RNASeq and proteins database. For certain genomes it worked but for some others it failed with similar errors as described in #582 and #577 (see logs …
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@lindseyfaye @rsmoak I have created a new subfolder to contain all analyses for the two protein families you have worked on. I suggest you start organizing the data and analyses in this folder -- prot…
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- The issue is related to the user-provided proteins feature and its associated issues.
- I am trying to use bakta to perform annotation on a phage predicted protein file that used Phanotate. I wa…