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Problem summary
If the choosen symbol for a Placeholder \( as Expression Syntax\) is also used in a “function command” that occured in a Error!
Steps to reproduce
* Create a Output Confi…
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https://mp.weixin.qq.com/s/1MUezfxnIlDAzdMkG9YtHA
ixxmu updated
2 years ago
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Hi:
* pvactools version: 2.0.4
* Python version: 3.7
* Operating System: latest docker image used
**Describe the bug**
"Tier" value in the final report is not consistent with "RNA_expr ".
I …
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https://mp.weixin.qq.com/s?__biz=MzA5NjAyMzU1OA==&mid=2247485359&idx=1&sn=ca3056625368cbf084bb4fa56cefcf19&chksm=90b722c6a7c0abd0d5d5b90a1496cebb0b361a58fdcd17313ba2c8c63222caeddeee0c418a32&xtrack=1&s…
ixxmu updated
2 years ago
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https://mp.weixin.qq.com/s/tnjOukjIFd1M3hVpZ49qlQ
ixxmu updated
2 years ago
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Dear all,
I suppose that all packages depending on `cgdsr` will use `cBioPortalData`.
Concretely,
1- Is there an equivalent to theses 6 commands?
2- The structure of data in `cgdsr` remain the sa…
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https://mp.weixin.qq.com/s/JTD8ZmH2YYCIqcbs-97JzA
ixxmu updated
2 years ago
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Hi I am encountering this error while issuing GDCprepare:
> project query GDCdownload(query,method = "api",chunks.per.download = 10)
> data Add clinical information to samples
**Error: lexical…
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I am using a dataset looking at tumor cells. I can categorize these tumor cells as AC-like, OPC-like, ODC-like using the `AddModuleScore()` function. I want to create a violin plot to look at specific…
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数据集名称*：Early Breast Cancer Core-Needle Biopsy WSI (BCNB) Dataset，早期乳腺癌患者的穿刺活检WSI
标注内容*（标注的器官/病灶）：在早期乳腺癌患者的病理WSI中，标注了部分的肿瘤区域，并提供了一些临床信息（age, tumor size, tumor type, ER, PR, HER2, HER2 expression, hi…