-
In the following (l.1854), we may consider providing a citation, e.g., Kuhner et al. equation 1, https://www.genetics.org/content/156/3/1393.
The equation in the manuscript provided adds the variab…
-
Hi,
Thanks for this pipeline. I am at the same time looking at m2m. I wonder how to generate a "seed" file in .xml especially if I have no idea about the medium that would be used for the communit…
-
**Describe the bug**
The following piece of code
```
import unittest
import os
import scipy
import numpy as np
from dingo import MetabolicNetwork, PolytopeSampler
from dingo.gurobi_based_impl…
-
Hello,
with the new version of carveme(v1.5.1) I ran into inconsistencies with the chemical formula of some metabolites in my GEM.
Does the new version solve mass imbalanced reactions as a MILP by…
-
In the `model-importing` branch, I started an "app" to import models from model repositories (e.g., BiGG, BioModels, etc.)
- This will likely be implemented in Python
- This will probably be Python …
-
Hello,
I am traying to change the Metacyc ids to BIGG ids in my metabolic model. At the end I am having an error.
The command:
```py
cobra.io.write_sbml_model(raven_model, "file pathway.xml")
…
-
The following throws a unrecognized delimiter error in v3 but doesn't in v2 or "real" LaTeX.
```tex
\begin{equation*} \begin{array}{ccc}\operatorname {D}(Y) &\xrightarrow {\ \Phi \ } &\operatorna…
-
**Describe the bug**
User see "Oops! Trying to reconnect to the session ..." on iphone
**Behavior**
1. I click join button
2. I addree for camera and microphone permissions
3. I can not get ava…
-
- [x] dev: 615b562c2f1add0daafd6d2e (tellurium)
- [ ] org: 61610ddf09e39101d573cbab (COBRApy)
- [ ] org: 61610e1ae3fd8649821315d3 (COBRApy)
-
Filtros adicionais precisam estar declarados no arquivo de tradução texts.ini na seção filtros.
Ex.
```
[filter]
descriptor_filter="Assunto principal"
collection_bigg_sdg3="ODS3"
...
```