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I started using Rclusterpp.hclust(), but have found that it gives odd / incorrect results with some data sets that I've used it on. Of note, the returned object is not the same as that of hclust() {id…
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submission
repeat_harper_et_al_2012:
unfortunately......
there are certain names like "Moana, Moana Rape", which can be misinterpreted when reading into GWASSER, because they themselves have a…
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Hi Stephen (and others),
I'm the dreaded physician-scientist (with emphasis on former) a bit out of my depth. I'm an R amateur and maybe trying to build a plot using your beautiful-looking package …
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Following interactions should be added:
- When the user hovers over a gene, all the associations that are located in the gene should be highlighted
- when the user navigates over a associations i…
timeu updated
7 years ago
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Hello,
Great job on the program - looks very promising!
Unfortunately, I am having some issues implementing treeWAS using ClonalFrameML output. I can load the data just fine using the read.CFML(…
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SmoteRegress may have some difficulty succeeding on some numeric features.
```r
xy 1 and only the first element will be used
2: In if (class(dat[, col]) %in% c("factor", "character")) { :
the…
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Currently only the associations from the first page of table are show in the Manhattan plot. Can we display all associations (maybe as additional option)?!
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The Manhattan plot needs to display a color scale for the currently displayed coloring of the associations. This should be displayed as a band on the right side.
timeu updated
7 years ago
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Add MAC filtering prior to plotting manhattan plot.
Add filtering prior to ES indexing.
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All of the options in the dropdowns should follow standard capitalization and spacing rules, and b alphabetized. Adding small hints for now, until Qiime2 gets better, should also reduce user confusion…