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I run IQ-Tree multicore version 2.1.3 COVID-edition for Linux 64-bit built Apr 21 2021 with the following cmd:
iqtree2 -s used_outgrp.flt.snp.pop.cf -m GTR+P -nt AUTO -ntmax 14 -bb 1000
And I got th…
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Hello,
I am not sure if it is appropriate to ask a question about `lme4qtl` which is an extension of `lme4` (allows user-defined covariance structure of random effects), but I think the problem mig…
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I ran BitInput.py but the output doesn't correspond to what you have told me. For example, for x1=[0.25,0.35,0.5] I would expect 4 ones for 0.25, about 5 for 0.35 and 8 ones for 0.5. Instead, I get di…
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In the file `src/sage/rings/asymptotic/asymptotics_multivariate_generating_functions.py`, the function `asymptotics_multiple()` is insufficiently doctested. It seems that only the case "`n == d`" is…
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3.334 provisionally accepted taxa in Systema Dipterorum have a self-synonymizing synonym record. All of these taxa seem to be new in Feb 2024 version.
Some examples:
Agromyza dimidiata Melander, 1…
aoern updated
6 months ago
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Dear maintainers, thank you for the great package.
**Package version:**
0.1.3.8
**Problem desciprtion:**
I have encountered the following issue when using the `chisq` CI test. If the number of…
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Καλησπερα σας προσπαθω να υλοποιησω το binomial φιλτρο στο ερωτημα 2.4 μεσω της lfilter. Υπολογισα τον αριθμητη και τον παρανομαστη της συναρτησης H(z) και ειδα πως ο ορος α[0] (δηλαδη ο σταθερος ορος…
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Hi,
Thanks for making this package! I'm wondering whether this could easily be applied to a mixed logistic regression model, e.g.,
`glmer(cbind(success, failure) ~ x + (1|c), family = binomial)`
…
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I am filtering a multi VCF file of > 1000 sapmples, to identify somatic variants. So, I want to include variants which achieve this criteria:
1) SNPs
2) Observed once or twice (minor allele frequ…
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Current bootstrap confidence interval assumes a normal distribution of bootstrapped replicates. Instead, a better approximation would be to use the percentile interval.