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For use in the mi2b2 viewer, generate png thumbnails from the dataset.
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Something that popped up while I was setting up the testing infrastructure...
Conversion to `.mif.gz` gives different values from input...
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Hello!
The admin generation fails with Fatal error.
Because DialogHelper is no longer in SensioGeneratorBundle. There is only QuestionHelper
```
PHP Fatal error: Class 'Sensio\Bundle\GeneratorBundle…
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this is useful to know the current scene is oriented in the RAS space.
we need an extra renderer.
http://jsfiddle.net/aqnL1mx9/
on hover any of the elements, show a nice css overlay to tell us if th…
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I don't use freesurfer a ton, but the standard space images that come by default are not .nii.gz extension. For example, here we are calling tkregister2 and using brain.nii.gz:
reference = os.path…
vsoch updated
9 years ago
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I ran run_group.py with no arguments to estimate a group-level model in MNI space. The program crashed with the error message below. Looks like "mni152reg" is being treated as an option, wondering if …
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I left the following message on NeuroStars (http://neurostars.org/p/2680/):
"I am preparing to release a new version of the Mindboggle software (http://mindboggle.info) and need to make a decision ab…
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The apply_affine_transform() is incorrect or is applied incorrectly, since the resulting mean positions of labels/features in standard space have values in the 200s.
https://github.com/binarybottle/m…
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When I try to sync grandle after the step 11 I get the following error:
Gradle 'DArtes-MGZ' project refresh failed:
Could not find com.baker:ABaker:1.1.
Required by:
DArtes-MG…
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the following file produces an error with nibabel.load:
http://dl.dropbox.com/u/2140486/bad2.nii
FYI it was produced with freesurfer mri_vol2surf