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IGV is a very useful viewer for PacBio long read data, but it could be even better with a few modifications. Ideas to improve support for PacBio data are:
1. **Add a "quick consensus" mode** that onl…
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I run braker2 with RNA-seq data for a green algae genome with low GC content.
I get the final output with warning:
WARNING: Number of good genes is low (30). Recommended are at least 600 genes
…
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Hi,
thanks for recently adding the merging feature of PE reads #139 !
Would it be possible to implement a 3rd output parameter in order to separate the merged/unmerged reads in an intuitive way l…
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We'd like to provide support for other models of mutation. Here is a proposal for how to do this, in a two-stage protocol, that separates generating locations of the mutations (which can be done indep…
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arXiv论文跟踪
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Hello, I tried running two pipelines (called `acute_male_0h` and `control_male_0h`, custom genome and 5 replicates for each), and I'm seeing a few weird things going on.
First, I only see .log, .l…
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In this screenshot from http://legacy-staging1.cnx.org/content/col10031/latest/, there is an extra space under the stem for question 3.
I used Chrome Inspect to look at the markup for the asse…
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As an example:
Go to cegsvectors and then Sox2_Sox2_143kb~marker_backbone
Then do View -> PDF/PS
An error message appears. This happens for all sequence names containing a tilde.
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I tried running the test genomiser analysis using:
java -Xms4g -Xmx8g -jar exomiser-cli-11.0.0.jar --analysis test-analysis-genome.yml
I get the error:
A Tool to Annotate and Prioritize Exo…
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Hi Jin,
Thanks a lot for your prev help. We finally finished one of our samples.
This is its final stdout output:
```
[2019-10-27 02:02:30,45] [info] JobExecutionTokenDispenser stopped
[2019-…