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Hi Joey (and everyone else)!
I am making heat maps and would like to color the y axis labels according to my taxa to quickly get an overview of if the clustering put similar taxa (for example famil…
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Gut microbiome is not associated with mild cognitive impairment in Parkinson’s disease – Velma T. E. Aho – npj Parkinson's Disease
https://www.nature.com/articles/s41531-024-00687-1
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Hi, I used the nice tool CoverM for calculating the coverage of MAG, but get an error. Please give me some advice, thanks!
Code:
`coverm genome --coupled Reads/BPA_1.fastq Reads/BPA_2.fastq Reads/…
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Thanks for posting this public rebuttal! Good science is open science.
There's been some suggestion that removing environmental contaminants, as done in the original paper, removes the cancer sub-t…
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Associations of the Gut Microbiome With Treatment Resistance in Schizophrenia – Svetlina S Vasileva – JAMA Psychiatry
https://pubmed.ncbi.nlm.nih.gov/38294805/
[Associations of the Gut Microbiome Wi…
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For me, the relative abundance is the proportion of a bin in all bacteria in a sample. The value of abundance should be less than 100%. But in my result ` abundance_table.tab`, there are some value mo…
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Connect NMDC EDGE to core NMDC orchestration services
NMDC EDGE61 is currently powered by a cluster computing service managed by SDSC. We will implement
automation functions in NMDC EDGE to execute wo…
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Hello,
While I am able to install bowtie2, KrakenTools and samtools just as it is described in the Nature Protocols paper, I am unable to install Kraken2 and Bracken
I used the following code an…
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Trying to execute the 16s workflow via docker. From the documentation it sounded like only `usearch` would be missing due to its licensing issues, however it seems that `vsearch` is also excluded fro…
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**Use Cases**
As a course operator, I want to…
- All courses about a particular topic, so I can spot most and least popular courses, or courses where learners are finishing or struggling to finish.
…