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I was monitoring this for a while with the wrong query so i didnt realize it was growing .
Defining mutations:
XBB.1.16 >> > C29386T > A25410G > Orf1a:P748L (T2242C),Orf1a:E972K (C2508T), G3179A, …
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From (https://github.com/sars-cov-2-variants/lineage-proposals/issues/104)
FL.13+C21904T,T6334C,C7843T+A22629C(S:K356T)
GISAID query: C21904T,T6334C,C7843T,A22629C
No. of seqs: 26(China 24 Singap…
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We tracked this one for a while : https://github.com/sars-cov-2-variants/lineage-proposals/issues/298
**EDITED**
Just noticed that the parental lineage with Orf1a:G519S and Orf1a:G1101D has been des…
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**Defining mutations:** (On XBB.1.9.1 Polytomy) > A20458G(ORF1b:I2331V) > T23030C(S:F490P) >
**Query:** A20458G, T23030C, C11956T
**Earliest seq:** 2023-02-16 (Finland, EPI_ISL_17077296)
**Latest s…
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EG.5.1.1+S:G257V(G22332T)
GISAID query:Spike_G257V,Spike_F456L,Spike_Q52H
No. of seqs: 13( Xinjiang Hubei Heilongjiang Shanghai)
First: EPI_ISL_17775434, Xinjiang ,2023-5-13
Latest: EPI_ISL_…
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**Defining Mutations:** `EG.5.1` > `T15198A` > `C1191A(ORF1a:P309Q), A24999C(S:D1146A), A27642G, A28254Δ(ORF8:I121Δ)` > `C23280T(S:T573I)`
**Query:** `T15198A, C23280T, A24999C`
**Earliest seq:** 20…
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HK.3+S:V171I(G22073A)
GISAID query: G22927T,G22073A,-G21604T
No. of seqs: 6(Singapore 5 China 1)
First: EPI_ISL_18145963, Yunnan, 2023-8-14
Latest: EPI_ISL_18243561, Singapore, 2023-9-6
[us…
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**Defining Mutations:** **EG.13** (XBB.1.9.2 + ORF1a:K798N) > `C22995G(S:T478R)` > `C13551A, G23501T(S:A647S), G25522A(ORF3a:G44R), G26158A(ORF3a: V256I), G27420T`
**Query:** `C22995G, G23501T, G2552…
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I spotted a little cluster of three sequences of GJ.1.2 with S:N450D in three different far countries so i think it is worth proposing it immediately also keeping in mind that GJ.1.2 with just S:P521S…
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Defining mutations:
BA.2.86>A6183G (ORF1a:K1973R, but without C12815T)>C22986T (S:A475V)
GISAID query: A6183G, C22986T, -T3565C, -C22978T
Earliest seq: 2023-09-18 (Netherlands- EPI_ISL_184331408)…