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Hi Alain - hope you're doing well!
I just downloaded the 2020 datasets, and some of the naming conventions have changed in the Episodes dataset. These are causing problem with the read* functions.
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We already have support for xfm transforms, but we could use some more, e.g.:
* the `register.dat` format: https://surfer.nmr.mgh.harvard.edu/fswiki/RegisterDat
* lta format (affine matrix from su…
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Models from FreeSurfer exist in a coordinate system that is dependent on the originating volume.
Generally the origin of the model coordinate system exists at the center of the mri volume.
A modul…
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Thank you for a job well done. : )
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**What**
`olympus` and `cybertronpc` keep crashing. Is this due to RAM shortage, or PSU limitation?
**Why**
Crashes interrupt training and require manual reboot.
**How**
Determine how much RA…
erikr updated
4 years ago
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We could add support for the GCA/GCS probabilistic atlas format, see https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GcaFormat
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I found following processing issues in [r20200826](https://github.com/spine-generic/data-single-subject/releases/tag/r20200826) release.
**GM to correct:**
`sub-juntendoAchieva_T2star_rms.nii.gz…
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Freesurfer has `vox2ras-tkr` matrix, which has the same `Mdc` matrix as `vox2ras_matrix` but different location/center.
For example, I can read in `mgz` file with headers
```r
res [,1] [,…
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Hi Gao,
when I run the code below:
`cortex.segment.cut_surface(user,'lh')`
I modifified the blender file like this as you suggest before, and save it.
![image](https://user…
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hi, I have a question to ask you. I want let rh.white template to fsaverage5.
I know can use mri_surf2surf, but I don't know how to set the parameters(srcsurfval、 src_type 、trg_surf)
**mri_surf2surf…