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There appears to be a EG.5.1.3 sublineage with ORF1a:T2274I (C7086T; NSP3:T1456I), S:L455F (G22927T), and S:S704L (C23673T) first detected in France.
As of 2023-09-13, Cov-Spectrum reports 35 good-…
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Transferred from Pango:
https://github.com/cov-lineages/pango-designation/issues/2160
2 XBB.1.5.10 (S:F456L) samples (EPI_ISL_18038309, EPI_ISL_18062480) from Ontario and Alberta have also S:L455F…
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### **Description—First sequence spotted by @c19850727 (Sakaguchi Hitoshi) and @hynnspylor ([here](https://github.com/cov-lineages/pango-designation/issues/2068#issuecomment-1680316776)) **
**Sub-li…
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**Defining Mutations:** `FK.1.3.2` > `T25812C` > `C17352T, G24893C(S:E1111Q)`
**Query:** `C9391T, G24893C, T25812C`
**Earliest seq:** 2023-05-29 (`EPI_ISL_17958623`, Chiba, Japan)
**Latest seq:** 2…
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I spotted a little interesting recent cluster of XBC.1.6 carrying additional mutation at S:445 , this time to A.
Defining mutations: XBC.1.6 >>T8707C, C26735T > C10156T > C29762T > S:V445A (T22896C…
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Credit to @NkRMnZr
## EG.5.2+S:K679R
EG.5.2> A6729G(Orf1a:N2155S)> C11518T> C3602T(Orf1a:H1113Y)> A25744G(Orf3a:I118V, shared with EG.5.2.1)> A23598G(S:K679R)
Query: A6729G, A23598G
Earliest seq…
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https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_…
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GISAID query: C23202T, T12730A, T28297C, A28447G
No. of seqs: 53( USA 6, Singapore 4, Ireland 1, Germany 1, England 4, Denmark 1, Canada 1, Austria 1, Australia 1, India 33)
First seq: EPI_ISL_17…
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Transferred from https://github.com/sars-cov-2-variants/lineage-proposals/issues/396
XBB.1.5+C4586T,T16974C,C7124T(Orf1a:P2287S),A22115G(S:N185D)
GISAID query: T16974C,A22115G,-C23673T
No. of seq…
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**Defining Mutations:** [_on top of CH.1.1 > C21811T branch, that is, **sibling to CH.1.1.11/17/28**_] > C2455T > A3186C(ORF1a:E974A), C14491T > C24134A(S:L858I) > C28512A(N:P80Q/ORF9b:Q77K)
**Query:…