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Hi,
I am very interested to run jcast on few of my alternatively spliced transcripts, especially step 2 of the publication. I already have differentially used junctions, not from rMATS but from lea…
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```
What steps will reproduce the problem?
1. Open AltAnalyze and begin
2. Click on Add New Species
3. receive error and program crashes
What is the expected output? What do you see instead?
Wha…
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Dear Authors,
First of all, many thanks for developing this great tool. I work with fission yeast and I have KO samples in which extensive intron retention expected. I used IRFinder on polyA mRNA-s…
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Currently, `import` happily allows importing the same symbol from more than one package, the last import wins:
```
> import::from("plyr", "arrange")
> environment(arrange)
> import::from("dplyr", "a…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/caggtaagtat/VarCon
Confirm the following by editi…
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*From @nathansobo on Tue, 05 Aug 2014 18:42:46 GMT*
I'm attempting to use vectors to represent the contents of 5-line tiles in Atom, and I'm keeping the groups of lines up to date with repeated appli…
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Unless there is something I am missing, it is difficult to add gates mid-circuit without using private QuantumCircuit variables such as _data. The best work around involves merging two circuits togeth…
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**version**
[borkdude/edamame "0.0.11-alpha.9"]
**platform**
OS/X 10.14.5
**problem**
When I specify `:read-cond :preserve`, the reader-conditional ends up in the output of `parse-strin…
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In fission yeast this protein (spo5) is a meiosis-specific RNA binding protein, and probably involved in meiosis-specific regulation. However, it isn't part of the spliceosome and alternative splici…
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Hi,
i'm trying to retrieve FUNCTION and/or ENTREZ_GENE from Uniprot on R 3.5.1 using UNIPROTKB as keys.
using simple code :
select(up, keys = xkeys, columns = c("FUNCTION"), keytype = "UNIPROT…