-
Create one or more input 23andMe file which encodes several specific situations.
Test corresponding rows of the imputed VCF:
Expected cases:
* homozygous mutation
* heterozygous mutation
* Y chromo…
-
Shouldn´t have missing data in final file, because of imputation.
Check what happens when imputing data.
-
Hello! I'm unsure if I'm in the right place to ask a question. :) I've been utilizing the JOMO package and have found immense value in reading several of your research papers. They've provided me with…
-
The `operational.time` variable is frequently zero when heat input or electric output at a plant are non-zero. This persists in the monthly data files, so there is clearly mis-coding of the operationa…
-
1. Include our published MDS/AML .meta files in the example data set
2. Run the 1000G Illumina Omni 2.5 data set through Genvisis to create imputation ready VCFs
3. Impute to the TOPMed reference pa…
-
We have lots of reversions, but beyond "immediate" reversions (those reverting a mutation on the parent node), it's not clear how to identify them. One clear way might be to look at mutations that hav…
-
Have a tutorial for dealing with categorical features in a machine learning problem, including the usage of tools inside `fklearn.training.transformation`.
-
@rl627
Some ZCTA's are missing monthly hospitalization data-- we believe this is because , "The rate of hospitalized cases per 100,000 people is suppressed for a specific geography when the count of…
-
This is part of some reforms coming from Democratic legislators (see https://github.com/PSLmodels/Tax-Calculator/issues/2305).
I didn't see Pell Grants specifically in the [ASEC field list](https:/…
-
Currently, we have `nan_mode` to process NaN values as "Min" or "Max". I think it's like imputing them to the "max" or "min" for the feature, is this correct? It doesn't sound very nice.
LightGBM (…