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### BPCells doesn't wok with chromatin assay
I am working with a big multiomics object. I updated Seurat to Version 5, because I need the support of BPcells to avoid breaking R because of the size of…
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Hi! I've been testing the package but every time I try to add a categorical variable to the formula, I get the following error:
```
Error in if (inherits(possibleError, "error") && grep("the fixe…
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Hello there,
I would like to use Mutational Patterns on Illumina data from a DNA virus genome amplified from clinical samples, in order to identify the mutational processes that generate new virus va…
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Hello, I was trying to work with the code uploaded and for some reason I get this error when I run summarizeMolecularProfiles
**Error in (function (classes, fdef, mtable) : unable to find an inher…
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**Describe the bug**
Hi. According to the log file, I keep getting an error which is found in `addIterativeLSI` for one of Arrow files generated using the tutorial dataset when I run the `addDoubletS…
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I tried to concatenate two heatmaps vertically, but I received this error. I have attached my session info.
> ht_list = ht1 %v% ht2 %v% ht3
Error in UseMethod("get.vertex.attribute") :
no appl…
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Hi,
I ran the pipeline successfully before, but recently I got an error at atacqc step on all my runs. No qc summary (json/html) file was created in qc directory. I am wondering whether anyone has …
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library(ggplot2)
library(cowplot)
library(scales)
library(reshape2)
library(data.table)
library(ape)
library(phyloGLM)
tree=read.tree(system.file("extdata", "sampleTree.nh", package="phyloGLM…
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I know this issue has come up a bunch (e.g., here: https://github.com/joey711/phyloseq/issues/1018 and https://github.com/joey711/phyloseq/issues/552 - but I noticed its closed but with many people as…
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Hi,
Thanks for `muscat`.
Sorry for bringing this silly error, I don't think most people have it. But, I recently noticed my environment does not work well with equal named functions.
I got an err…