-
Study summary external references
- [x] Study IDs starting with “NEALE2” -> http://www.nealelab.is/uk-biobank
- [x] Study IDs starting with “SAIGE” -> https://www.leelabsg.org/resources
Manhattan…
-
-
This week is OA week and we can have a few tweets on the theme for both Open Targets Genetics and Platform.
If you had some stats on the data in Open Targets Genetics I could write a tweet like:
…
-
This issue is a continuation somehow #72
I am showing an example in which we have snps with a prob_col value higher than the threshold but echolocatoR fails in assigning CS and PP to SNPs
acarras…
-
Nearly a fourth of the UKB subjects are missing rotated bvecs after eddy correction ("dMRI/dMRI/data.eddy_rotated_bvecs").
We're currently waiting for a response from UKB regarding the potential ca…
-
**Describe the bug**
When I attempt to view any of the files on hduhb's instance, I get the following error:
```
Traceback (most recent call last):
File "/usr/local/lib/python3.6/dist-packag…
-
Hello,
Apologies if this has been asked already, but I did search through the already posted issues...
I was wondering if some assistance/direction could be provided when running SAIGE-GENE+. Ba…
-
Hi @weizhouUMICH
I am running SAIGE for a binary trait with the UK Biobank data. Below is the command line I'm using with version SAIGE_0.38
```
Rscript ~/software/bin/step1_fitNULLGLMM.R \
…
-
Hi,
I got the following error when trying to run COJO
```
+++ Multi-finemap:: COJO +++
[1] "+ COJO:: conditional analysis -- Conditioning on: rs4721411"
sh: 1: /home/acarrasco/.conda/envs/ech…
-
Variant summary:
- [x] Show GRCh37 chrom, position information
Assigned genes section:
- [x] eQTL and pQTL labels are missing, I’ve updated these in `gs://genetics-portal-data/lut/v2g_display_lab…